dictyBase BLAST Server

Query Sequence

Enter query sequence in FASTA format

Gene or Gene Model ID

Enter gene or gene model ID (e.g.: DDB_G0275689, DDB0214814)

BLAST Program

Select Program

BLAST Database

New: you can now search D. discoideum and three other species

Select Organism
Select Database

You can download all the sequences

Options

E-value

Number of alignments to show

Word size

Matrix

Gapped alignment

Filter

DUST filter for BLASTN, SEG filter for all others.
Because of resource limits, when BLASTing against the Chromosomal database with filtering off, the filtering is actually set to 'm D' which turns off filtering for extending hits, but leaves filtering on when building the initial words.


		Genomes Dictyostelium discoideum Dictyostelium purpureum Genome Browser Dictyostelium discoideum Dictyostelium purpureum BLAST Download Dictyostelium discoideum Dictyostelium purpureum		Contact